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China New Product Genome Assembly - PacBio-Full-length Transcriptome (Non-Reference) – Biomarker


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China New Product Genome Assembly - PacBio-Full-length Transcriptome (Non-Reference) – Biomarker Detail:

Raw data procession


CCS extraction


Full-length non-chimeric(FLNC) reads identification


Consensus transcripts identification

Bioinformatics


Data quality control


Protein-protein interaction


Expression


Alternative splicing


Go enrichment

Transcipt identification


Unigenes construction


Isoform identification


Alternative splicing


Differential alternative splicng


APA analysis


Differential APA


Fusion genes


Differential fusion gene


Homologuos genes


Gene family


SSR


Gene structure optimization


SNP analysis


lncRNA prediction


lncRNA target prediction


CDS prediction


Transcription factor

Expression quantification


Differential expression analysis (on genes and on transcripts)

Functional annotation


Functional enrichment


Protein-protein interaction network


Product detail pictures:

China New Product  Genome Assembly - PacBio-Full-length Transcriptome (Non-Reference) – Biomarker detail pictures

China New Product  Genome Assembly - PacBio-Full-length Transcriptome (Non-Reference) – Biomarker detail pictures

China New Product  Genome Assembly - PacBio-Full-length Transcriptome (Non-Reference) – Biomarker detail pictures


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