Factory source Transcriptome - PacBio-Full-length Transcriptome (Non-Reference) – Biomarker
Factory source Transcriptome - PacBio-Full-length Transcriptome (Non-Reference) – Biomarker Detail:
Raw data procession
CCS extraction
Full-length non-chimeric(FLNC) reads identification
Consensus transcripts identification
Bioinformatics
Data quality control
Protein-protein interaction
Expression
Alternative splicing
Go enrichment
Transcipt identification
Unigenes construction
Isoform identification
Alternative splicing
Differential alternative splicng
APA analysis
Differential APA
Fusion genes
Differential fusion gene
Homologuos genes
Gene family
SSR
Gene structure optimization
SNP analysis
lncRNA prediction
lncRNA target prediction
CDS prediction
Transcription factor
Expression quantification
Differential expression analysis (on genes and on transcripts)
Functional annotation
Functional enrichment
Protein-protein interaction network
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