High-throughput amplicon and transcriptomic products tailored for Sydney researchers
The Internal Transcribed Spacer (ITS) region of nuclear ribosomal DNA—spanning ITS1, the 5.8S rRNA gene, and ITS2—is globally recognized as the standard molecular barcode for fungal taxonomy and biodiversity studies. In Sydney and across Greater New South Wales (NSW), precise identification of fungal communities plays a pivotal role in environmental management, agricultural health, biosecurity, and biopharmaceutical discovery.
Biomarker Technologies (BMKGene) brings world-class genomic capabilities to the Sydney scientific community. By leveraging ultra-high-throughput Next-Generation Sequencing (NGS) alongside cutting-edge PacBio HiFi long-read and Oxford Nanopore platforms, we deliver species-level fungal taxonomy with unmatched resolution.
Traditional short-read sequencing of only the ITS1 or ITS2 sub-region often resolves fungal taxa down to the genus level. BMKGene’s full-length ITS amplicon sequencing captures the complete 600–800 bp cassette, unlocking precise species-level and strain-level classification vital for pathogenic identification and soil ecology studies.
Sydney serves as Australia’s premier biotechnology center, home to world-renowned research institutes including the University of Sydney, UNSW Sydney, University of Technology Sydney (UTS), CSIRO research facilities, and the Hawkesbury Institute for the Environment.
Transparent pricing tiers tailored for academic research, government biosecurity, and commercial biotechnology
When evaluating ITS sequencing pricing in Sydney, costs depend on several key factors: sample preparation, targeted region (ITS1 vs. ITS2 vs. Full-Length ITS1-5.8S-ITS2), platform technology (Illumina NovaSeq PE250 vs. PacBio Sequel IIe / Nanopore), and bioinformatics depth. BMKGene offers scalable pricing packages designed to fit both individual PHD project budgets and large-scale industrial metagenomic grants.
| Service Package | Target Region | Sequencing Platform | Target Depth | Est. Price Range (AUD / sample)* | Recommended Application |
|---|---|---|---|---|---|
| ITS1 / ITS2 Short Amplicon | ITS1 or ITS2 region (~250-300 bp) | Illumina NovaSeq PE250 | 50,000 - 100,000 Reads | $35 - $65 AUD | High-throughput soil & rhizosphere ecological profiling. |
| Full-Length ITS Amplicon | ITS1-5.8S-ITS2 (~600-800 bp) | PacBio Sequel IIe (HiFi) | 20,000 - 30,000 HiFi Reads | $85 - $140 AUD | Species-level species identification, mycorrhizal taxonomy. |
| Ultra-Long Full-Length ITS | ITS + LSU / SSU (~1.5-2.5 kb) | Oxford Nanopore PromethION | 50,000+ Long Reads | $75 - $125 AUD | Novel fungal strain discovery & phylogenetic mapping. |
| Shotgun Fungal Metagenomics | Whole Environmental DNA | Illumina NovaSeq / DNBSEQ-T7 | 6 GB - 12 GB Data/sample | $180 - $290 AUD | Functional gene profiling & unculturable mycodiversity. |
| De Novo Fungal Genome | Whole Fungal Isolate DNA | PacBio HiFi + Illumina QA | 100x Coverage | Custom Quote | Pathogen reference genome building & industrial enzyme mapping. |
*Note: Prices vary depending on batch size, nucleic acid extraction requirements, and bioinformatic customization. Contact our Sydney account specialists for formal quotations.
By utilizing our high-throughput Brilliant Lab 1000 (BL1000) automated library prep system, we dramatically reduce labor overhead, passing direct cost savings to Sydney laboratories.
Standard data delivery within 2 to 3 weeks from sample receipt. Expedited sequencing options are available for urgent Sydney biosecurity or agricultural monitoring projects.
All projects include access to the self-developed BMKCloud system, enabling Sydney researchers to execute Alpha/Beta diversity, UNITE alignment, and taxonomic heatmaps without advanced coding skills.
Translating advanced genomic sequencing into actionable agricultural, ecological, and industrial solutions
New South Wales accounts for a substantial portion of Australia’s grain, cotton, and wine production. Fungal soil pathogens such as Fusarium, Rhizoctonia, and Verticillium pose severe threats to crop yields.
BMKGene’s ITS1-ITS2 and Full-Length amplicon sequencing allows agronomists across regional NSW and Sydney research stations to track soil microbiome shifts, evaluate bio-fertilizer efficacy, and diagnose latent fungal infections long before visual crop symptoms emerge.
Following catastrophic bushfire events in the Blue Mountains and Greater Sydney region, soil fungal recovery is crucial for regenerating native eucalyptus species through ectomycorrhizal networks.
Environmental researchers utilize our PacBio full-length ITS profiling to catalog post-fire fungal successional dynamics, identifying pioneer fungal species that accelerate habitat restoration.
Sydney Harbour, Botany Bay, and coastal marine ecosystems contain complex microbial communities where marine fungi play essential roles in nutrient cycling and algal interactions.
High-throughput ITS amplicon sequencing enables marine biologists in UTS and University of Sydney to explore uncultivated marine fungi, uncovering novel secondary metabolites for marine biotechnology applications.
From Hunter Valley vineyards to Sydney’s craft brewing and biopharmaceutical hubs, fungal strains (yeasts and molds) are fundamental to industrial bio-processing.
Our de novo fungal genome assembly and ITS sequencing pipelines ensure strict quality control, strain authentication, and genetic stability monitoring across multi-generational production cycles.
16+ years of innovation, over 60 national invention patents, and 200+ software copyrights
Founded in 2009, Biomarker Technologies (BMKGene) is a leading global provider of multi-omics solutions spanning genomics, metagenomics, epigenetics, single-cell omics, transcriptomics, and proprietary spatial transcriptomics (BMKMANU S3000). Backed by an advanced global network, we serve over 84 regions worldwide with unmatched sequencing quality and bioinformatics expertise.
PacBio platforms: Sequel II, Sequel, RSII
Nanopore platforms: PromethION P48, GridION X5, MinION
10X Genomics: 10X ChromiumX, Controller
Illumina platforms: NovaSeq
BGI-sequencing platforms: DNBSEQ-G400, DNBSEQ-T7
Bionano Irys system | Waters XEVO G2-XS QTOF | QTRAP 6500+
• Advanced biomolecular laboratory instruments.
• Standardized labs for sample extraction, library construction, clean rooms, and high-throughput sequencing.
• Strict SOP execution guaranteeing complete sample integrity from extraction to bioinformatic report delivery.
• Self-developed interactive BMKCloud platform.
• High-performance cluster with 41,104 GB RAM and 3 PB total storage.
• 4,260 computing cores delivering peak computing power over 121,708.8 Gflop/s.
Biomarker Technologies (BMKGene) and PerkinElmer have jointly engineered the Brilliant Lab 1000 (BL1000), a fully automated production line applied to high-throughput NGS library construction.
By automating liquid handling, indexing, and quality control, BMKGene significantly enhances sequencing throughput, elevates library consistency, and drastically reduces delivery turnaround time for Sydney researchers.
Standardized procedures under strict SOPs certified by international standards
Ready to kickstart your fungal microbiome or genomic project in New South Wales? Contact our bioinformatic specialists to receive detailed pricing, experimental design advice, and turnaround timelines.
We will be in touch within 24 hours.
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Delivering end-to-end genomic sequencing solutions including ITS amplicon sequencing, full-length transcriptomics, metagenomics, and custom bioinformatics. Trusted by leading academic institutions and industries across Australia and 84 regions worldwide.
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