Genome-wide Association Analysis
1. Auaunaga Tulaga
● Mata'utia Poloketi: talu mai lona fa'avaeina i le 2009, ua mae'a e le BMKGENE le fiaselau o ituaiga galuega fa'atino i le faitau aofa'i o su'esu'ega a le GWAS, fesoasoani i tagata su'esu'e e fa'asalalau tala e sili atu i le 100, ma o le aofa'i o a'afiaga na o'o atu i le 500.
● Tagata suʻesuʻe tomai.
● Taamilosaga suʻesuʻe puupuu.
● Fa'amatalaga sa'o.
2. Auaunaga Fa'amatalaga
| Ituaiga | Fua o Tagata | Fa'asologa o fuafuaga ma le loloto |
| SLAF-GWAS | Fa'ata'ita'iga numera ≥200 | Genome size <400M, fa'atasi ai ma ref-genome, WGS fautuaina |
| Genome tele ≤ 1G, 100K Fa'ailoga ma 10X | ||
| 1G ≤ Genome tele ≤ 2G, 200K fa'ailoga ma 10X | ||
| Genome size > 2G, 300K Fa'ailoga ma 10X | ||
| WGS-GWAS | Fa'ata'ita'iga numera ≥200 | 10X mo faʻataʻitaʻiga taʻitasi |
3. Filifiliga o Mea
O ituaiga eseese, subspecies, landraces/genebanks/aiga fefiloi/sources vao
O ituaiga eseese, subspecies, landraces
Aiga afa-sib/aiga-sib-atoa/aiga vao
4. Bioinformation Iloiloga
● Su'esu'ega fa'asoso'oga a le Genome-wide
● Su'esu'ega ma su'esu'ega SNP taua
● Fa'amatalaga fa'atino ole gene sui
5. Galulue Galuega Au'aunaga
Fa'ata'ita'iga mamanu
Fa'ata'ita'iga tu'uina atu
RNA su'ega
Fauga faletusi
Fa'asologa
Iloiloga fa'amaumauga
Au'aunaga pe a uma ona fa'atau
a.Phenotype QC
Fa'asologa o fa'asologa o taimi
Fuainumera fa'atusa
e.Su'esu'ega fa'atasi (Fa'ata'ita'iga: GEMMA, FaST-LMM, EMMAX)
QQ Fuafuaga
Manhattan Plot
| Tausaga | Tusitala | IF | Ulutala |
| 2022 | NC | 17.69 | Genomic faavae o giga-chromosomes ma giga-genome o laau peony Paeonia ostii |
| 2015 | NP | 7.43 | O tulagavae o le fale e taula ai vaega genomic e taua tele i le soya |
| 2018 | MP | 9.32 | O le fa'asologa atoa o le genome o se aofa'iga i le lalolagi atoa o fa'asoa fa'atosina o lo'o fa'aalia ai le fa'avae fa'avae o lo latou 'ese'esega fa'anatura. |
| 2022 | HR | 7.29 | Genome-wide association su'esu'ega e maua ai fa'amatalaga mole mole i le suiga fa'anatura ole lapo'a fatu meleni |
