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Alaabta

Illumina iyo BGI

Tignoolajiyada isku xigxiga ee Illumina, oo ku salaysan Taxane by Synthesis (SBS), waa hal-abuur caalami ah oo la aqbalay NGS, oo mas'uul ka ah soo saarista in ka badan 90% xogta isku xigxiga ee adduunka.Mabda'a SBS waxa ay ku lug leedahay sawirida shucaaca leh ee lagu calaamadiyay joojinta dib loo rogi karo marka dNTP kasta lagu daro, ka dibna la kala qaado si loogu ogolaado ku darida saldhiga xiga.Iyada oo dhammaan afarta dNTP-yada ku xidhan ee dib loo rogi karo ay ku jiraan meerto kasta oo taxane ah, tartanka dabiiciga ahi waxa uu yareeyaa eexda ku darista.Tiknoolajiyadan wax-ku-oolka ah waxay taageertaa maktabadaha hal-akhriska ah iyo kuwa-dhamaadka-dhamaadka ah, iyada oo u adeegaysa noocyo badan oo codsiyo genomic ah.Awoodaha wax soo saarka sare ee Illumina iyo sida saxda ah waxay u dhigayaan inay tahay tiir udub dhexaadka cilmi baarista genomics, taasoo awood siinaysa saynisyahanada inay daaha ka rogaan qalafsanaanta genome-yada oo leh tafatir iyo hufnaan aan isbarbar dhigin.

DNBSEQ, oo ay soo saartay BGI, waa tignoolajiyada cusub ee NGS oo ku guulaysatay inay hoos u dhigto kharashyada isku xigxiga iyo kordhinta wax soo saarka.Diyaarinta maktabadaha DNBSEQ waxay ku lug leedahay kala-goynta DNA-da, diyaarinta ssDNA iyo wareegga wareegga wareegga si loo helo DNA nanoballs (DNB).Kuwan ayaa markaa lagu raraa dusha adag oo ka dibna la isku xigxigay isku-darka Baadhista-Anchor Synthesis (cPAS).

Adeegeena isku xigxiga maktabadda ee horay loo sameeyay waxa uu u sahlayaa macaamiisha diyaarinta isku xigxiga maktabadahooda ilo kala duwan (mRNA, genom dhan, amplicon, iyo kuwo kale).Ka dib, maktabadahan waxaa loo rari karaa xarumahayada isku xigxiga ee ilaalinta tayada iyo isku xigxiga ee goobaha Illumina ama BGI.


Faahfaahinta Adeegga

Natiijada Demo

Astaamaha

Madal:Illumina NovaSeq 6000, NovaSeq, HiSeq X Ten iyo BGI-DNB-T7

Hababka isku xigxiga:PE50, PE100, PE150, PE250

Xakamaynta tayada maktabadaha ka hor inta aan la isku dayin

Isku xigxiga gudbinta xogta iyo QC:keenista warbixinta QC iyo xogta cayriin ee qaabka fastq ka dib kala saarista iyo shaandhaynta Q30 ayaa akhriya.

 

Faa'iidooyinka Adeegga

Kala duwanaanshiyaha adeegyada isku xigxiga:macmiilku waxa uu dooran karaa isku xigxiga haadka, unugga socodka ama cadadka xogta.

Kala duwanaanshaha aaladaha:Maktabadaha DNB waxaa loo wareejin karaa goobaha Illumina

Khibrad ballaadhan oo ku saabsan goobta isku xigxiga ee Illumina:kumanaan mashruuc oo xidhan oo noocyo kala duwan leh. 

Soo gudbinta isku xigxiga warbixinta QC:oo leh cabbiro tayo leh, saxnaanta xogta iyo guud ahaan waxqabadka mashruuca isku xigxiga.

Habka isku xigxiga ee qaangaadhka ah:oo leh waqti gaaban oo wareeg ah.

Xakamaynta tayada adag: waxaan hirgelineynaa shuruudo adag oo QC ah si loo dammaanad qaado keenista natiijooyin tayo sare leh oo joogto ah.

Tusaalaha Shuruudaha*

Taxanaha Qaybta Haadka

Qadarka Xogta (X)

Xooga saarida (qPCR/nM)

Mugga

X ≤ 50 Gb

≥ 2 nM

≥ 20 μl

50 Gb ≤ X <100 Gb

≥ 3 nM

≥ 20 μl

X ≥ 100 Gb

≥ 4 nM

≥ 20 μl

Jidka Keliya (Illumina)

Platform

Xooga saarida (qPCR/nM)

Mugga

HiSeq X Ten

≥ 2 nM

≥ 20 μl

NovaSeq 6000 SP

≥ 1 nM

≥ 25 μl

NovaSeq 6000 S4

≥ 1.5 nM

≥ 25 μl

NovaSeq X

≥ 1.5 nM

≥ 25 μl

BGI-DNBSEQ-T7

≥ 1.5 nM

≥ 25 μl

 Marka lagu daro fiirsashada iyo wadarta qaddarka, qaab ku habboon ayaa sidoo kale loo baahan yahay.

 

Fadlan nala soo xidhiidh haddii shaybaarkaagu aanu buuxin shuruudaha alaabta bilowga ah.

Socodka Shaqada Adeegga

diyaarinta muunad

Xakamaynta tayada maktabadda

Isku xigxiga

Isku xigxiga

Falanqaynta xogta

Xakamaynta tayada xogta

Tusaalaha QC

gaarsiinta mashruuca


  • Hore:
  • Xiga:

  • Warbixinta maktabadda QC

    Warbixin ku saabsan tayada maktabadda ayaa la bixiyaa ka hor inta aan la isku dayin, la qiimeynayo qaddarka maktabadda, iyo kala qaybsanaanta.

     

    Isku xigxiga warbixinta QC

     

    Shaxda 1. Tirakoobka xogta isku xigxiga.

    Tusaalaha Aqoonsiga

    BMKID

    Ceyriin wax akhriya

    Xogta ceeriin (bp)

    Akhris nadiif ah (%)

    Q20 (%)

    Q30 (%)

    GC(%)

    C_01

    BMK_01

    22,870,120

    6,861,036,000

    96.48

    99.14

    94.85

    36.67

    C_02

    BMK_02

    14,717,867

    4,415,360,100

    96.00

    98.95

    93.89

    37.08

    Jaantuska 1. Qaybinta tayada oo la akhriyo muunad kasta

    A9

    Jaantuska 2. Qaybinta nuxurka aasaasiga ah

    A10

    Jaantuska 3. Qaybinta waxa la akhriyay ee xogta isku xigxiga

    A11

     

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