条形 ibhanile-03

Iimveliso

I-Chromatin Immunoprecipitation Sequencing (ChIP-seq)

I-Chromatin Immunoprecipitation (CHIP) bubuchule obusebenzisa izilwa-buhlungu ukuba zityebise ngokukhetha iiproteni ezibophelela i-DNA kunye neethagethi zazo ezihambelana ne-genomics. Ukuhlanganiswa kwayo kunye ne-NGS kwenza ukuba i-genome-wide profiling yeethagethi ze-DNA ezinxulumene nokuguqulwa kwe-histone, izinto ezibhaliweyo, kunye nezinye iiprotheni ezibophelelayo ze-DNA. Le ndlela iguquguqukayo yenza uthelekiso lweendawo ezibophelelayo kuzo zonke iintlobo zeeseli ezahlukeneyo, izicubu, okanye iimeko. Izicelo ze-ChIP-Seq zisusela ekufundeni umgaqo woshicilelo kunye neendlela zophuhliso ukuya ekucaciseni iindlela zesifo, oko kuyenza ibe sisixhobo esibalulekileyo sokuqonda ubume bolawulo lwe-genomic kunye nokuqhubela phambili kweembono zonyango.

Iqonga: Illumina NovaSeq


Iinkcukacha zeNkonzo

Bioinformatics

Iziphumo zeDemo

Iinkonzo eziluncedo

Uhlalutyo oluPhezulu lwe-Bioinformatic kunye ne-Comprehensive Annotation:Sisebenzisa ii-database ezininzi ukuze sichaze ngokusebenzayo iijene ezihambelana nemimandla yeprotheyini-DNA ebophelelayo, inikezela ngengqiqo kwiinkqubo zeselula kunye neemolekyuli eziphantsi kwentsebenziswano.

Inkxaso yasemva kwentengiso:Ukuzinikela kwethu kudlulela ngaphaya kokugqitywa kweprojekthi kunye neenyanga ezi-3 emva kokuthengiswa kwenkonzo. Ngeli xesha, sinikezela ngokulandelelana kweprojekthi, uncedo lokusombulula ingxaki, kunye neeseshoni ze-Q&A ukujongana nayo nayiphi na imibuzo enxulumene neziphumo.

Amava Abanzi:Ngerekhodi yokugqiba ngempumelelo iiprojekthi ezininzi ze-ChIP-Seq, inkampani yethu izisa ngaphezulu kweminyaka elishumi yobuchule etafileni. Iqela lethu lohlalutyo lwezakhono eziphezulu, lidityaniswa nomxholo obanzi kunye nenkxaso yasemva kokuthengisa, iqinisekisa impumelelo yeeprojekthi zakho.

● ULawulo loMgangatho olungqongqo: Sisebenzisa iindawo zolawulo ezingundoqo kuzo zonke izigaba, ukusuka kwisampulu kunye nokulungiswa kwethala leencwadi ukuya kulandelelwano kunye ne-bioinformatics. Olu hlolo lucokisekileyo luqinisekisa ukuhanjiswa kweziphumo ezihlala zikumgangatho ophezulu.

IiNgcaciso zeNkonzo

Ithala leencwadi

Isicwangciso solandelelwano

Imveliso yedatha ecetyiswayo

Ulawulo lwemeko

I-DNA ecocekileyo emva kwe-Immunoprecipitation

Illumina PE150

I-10Gb

Q30≥85%

IiMfuno zeSampulu

Imali iyonke: ≥10 ng

Ukuhanjiswa kobungakanani beqhekeza: 100-750 bps

Ukuhamba komsebenzi weNkonzo

ukuhanjiswa kwesampuli

Ukuhanjiswa kwesampuli

ULungiselelo lweThala leeNcwadi

Ukwakhiwa kwethala leencwadi

Ukulandelelanisa

Ukulandelelanisa

Uhlalutyo lwedatha

Uhlalutyo lwedatha

Emva kweeNkonzo zentengiso

Iinkonzo emva kokuthengisa


  • Ngaphambili:
  • Okulandelayo:

  • 图片91的副本

    Ibandakanya uhlalutyo olulandelayo:

    ● Ulawulo lomgangatho wedatha ekrwada

    ● Incopho yobizo esekelwe kwimephu yereferensi yegenome

    ● Inkcazo yemfuza ehambelana nencopho

    ● Uhlalutyo lwe-Motif: ukuchongwa kwe-transcription factor binding sites (TFBS)

    ● Uhlalutyo lweNcopho eyahlukileyo kunye nenkcazo

    Uvavanyo lokutyebisa kufutshane neNdawo yokuQala yokuKhutshelwa (TSSs)

     

    umfanekiso we92

     

    Ukuhanjiswa kweGenome ngokubanzi kweencopho ze-CHIP

    umfanekiso we93

     

    Ukuhlelwa kwemimandla encopho

    umfanekiso we94

    Ukutyebisa okusebenzayo kwemfuza enxulumene nencopho (KEGG)

    图片95

    fumana isicatshulwa

    Bhala umyalezo wakho apha kwaye uwuthumele kuthi

    Thumela umyalezo wakho kuthi: