● Iiprobe ezikhethekileyo zisetyenziselwa ukuphelisa i-ribosomal cDNA.
● Ukwakhiwa kwethala leencwadi elikhethekileyo.
● Umsebenzi omnye wokufumana idatha ye-mRNA, i-lncRNA kunye ne-circRNA ngaxeshanye.
● Ulawulo Oluqinileyo Lomgangatho: Sisebenzisa amanqaku olawulo oluphambili kuzo zonke izigaba, ukusuka ekulungiseleleni iisampulu kunye nethala leencwadi ukuya kulandelelwano kunye ne-bioinformatics. Olu hlolo olucokisekileyo luqinisekisa ukunikezelwa kweziphumo ezisemgangathweni ophezulu rhoqo.
● Inkxaso Emva Kokuthengisa: Ukuzinikela kwethu kudlulela ngaphaya kokugqitywa kweprojekthi kunye nexesha leenkonzo emva kokuthengisa leenyanga ezi-3. Ngeli xesha, sinikezela ngokulandela iprojekthi, uncedo lokusombulula iingxaki, kunye neeseshoni ze-Q&A ukuphendula nayiphi na imibuzo enxulumene neziphumo.
| Ithala leeNcwadi | Iqonga | Idatha ecetyiswayo | Idatha ye-QC |
| ilayibrari yesikhokelo ephelileyo ye-rRNA | I-Illumina PE150 | 10-16 Gb | Q30≥85% |
Iinukleotide:
| Isixa (ng) | Umthamo (μL) |
| 40 | 20 |
Izicubu:
I-Exosome: 100 μL; 40 μg; >10^9 amasuntswana/mL
I-serum/plasma: 5 mL
I-supernatant yenkcubeko yeseli: 100 mL
Umchamo: 100 mL
Amathe: 15 mL
Ukukhupha iimpumlo: 15 mL
Ulwelo lweCerebrospinal: 15 mL
Ulwelo lwe-Amniotic: 50 mL
Amadlozi: 5 mL
Inyongo: 5 mL
Ii-Ascites: 50 mL
Ubisi: 15 mL
Ulwelo lweFollicular: 15 mL
I-supernatant yelindle: 50 mL
I-supernatant yenkcubeko ye-microbial: 100 mL
Izicubu zezilwanyana: 3 g
Izicubu zesityalo: 1 g
Isikhongozeli: ityhubhu ye-centrifuge ye-2 mL (Akukhuthazwa ukusebenzisa i-tin foil)
Iilebheli zesampulu: Iqela + ikopi umz. A1, A2, A3; B1, B2, B3.
Ukuthunyelwa:
1. Umkhenkce owomileyo: Iisampulu kufuneka zipakishwe kwiingxowa zize zingcwatywe kumkhenkce owomileyo.
2. Iityhubhu ze-RNAstable: Iisampulu ze-RNA zingomiswa kwityhubhu yokuzinzisa i-RNA (umz. i-RNAstable®) kwaye zithunyelwe kubushushu begumbi.
I-Bioinformatics
Uqikelelo lwe-circRNA: usasazo lwe-chromosome
Ii-circRNA ezichazwe ngokwahlukileyo – iploti yevolcano
Ii-circRNA ezichazwe ngokwahlukileyo - ukuhlanganiswa kwe-hierarchical
Ukutyebisa okusebenzayo kwezakhi zofuzo ze-circRNA
Uhlalutyo lwe-Differential Gene Expression (DEGs)
Ukulinganiswa kokubonakaliswa kwe-lncRNA - ukuqokelelana
Ukutyetyiswa kwe-genes ekujoliswe kuyo ye-lncRNA
Uhlalutyo lwendawo ye-mRNA kunye ne-lncRNA edibeneyo – Iploti ye-Circos (isangqa esiphakathi yi-mRNA kwaye i-inner cicrlce yi-lncRNA)