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Alaabta

Isku xigxiga guud ee bini'aadamka

Human Whole exome sequencing (hWES) waxaa si weyn loogu aqoonsaday habka isku xigxiga ee kharash-ku-ool ah oo awood leh oo tilmaamaya isbeddellada cudur-sidaha. Inkasta oo ay ka kooban yihiin kaliya 1.7% genome-ga oo dhan, exons waxay ciyaaraan door muhiim ah iyagoo si toos ah u muujinaya astaanta guud ee shaqooyinka borotiinka. Gaar ahaan, genome-ka aadanaha, in ka badan 85% isbeddellada la xiriira cudurrada ayaa ka muuqda gobollada codeing borotiinka. BMKGENE waxay bixisaa adeeg dhamaystiran oo dabacsanaan ah oo isku xigxiga bini'aadamka oo dhan oo leh laba xeelado soo jiidasho oo kala duwan oo la heli karo si loo gaaro yoolalka cilmi-baarista ee kala duwan.


Faahfaahinta Adeegga

Natiijooyinka Demo

Tilmaamaha Adeegga

● Laba qaybood oo exome ah ayaa diyaar ah oo ku salaysan kobcinta bartilmaameedka ee baaritaanka: Sure Select Human All Exon v6 (Agilent) iyo xGen Exome Hybridization Panel v2 (IDT).

● Taxanaha Illumina NovaSeq.

● dhuumaha bioinformatic ee ku jihaysan baarista cudurada ama falanqaynta burada.

Faa'iidooyinka Adeegga

Bartilmaameedsada Gobolka Codaynta Borotiinka: Qabashada iyo isku xigxiga gobollada koodka borotiinka, hWES waxaa loo adeegsadaa si loo muujiyo kala duwanaanshiyaha la xiriira qaab-dhismeedka borotiinka.

Qiimaha Waxtarka leh:hWES waxay soo saartaa ku dhawaad ​​85% isbedelada la xidhiidha cudurada bini'aadmiga laga bilaabo 1% ee genome-ka aadanaha.

Saxnaanta Sare: Iyada oo qoto dheer oo isku xigxig ah, hWES waxay fududaynaysaa ogaanshaha noocyada caadiga ah iyo noocyada dhifka ah ee leh soo noqnoqoshada ka hooseeya 1%.

Xakamaynta tayada adagWaxaan hirgelineynaa shan qodob oo kontorool oo muhiim ah dhammaan heerarka, laga bilaabo muunad iyo diyaarinta maktabadda ilaa isku xigxiga iyo bioinformatics. Kormeerkan taxaddar leh wuxuu xaqiijinayaa gaarsiinta natiijooyin tayo sare leh oo joogto ah.

Falanqaynta Bioinformatics oo dhamaystiran: dhuunteenu waxay dhaaftay aqoonsiga kala duwanaanshaha genome-ka tixraaca, maadaama ay ku jirto falanqaynta horumarsan ee loogu talagalay in si gaar ah wax looga qabto su'aalaha cilmi-baarista ee la xidhiidha dhinacyada hidde-socodka ee cudurrada ama falanqaynta burooyinka.

Taageerada Iibka Kadib:Ballanqaadkayaga waxa uu dhaafsiisan yahay dhamaystirka mashruuca oo leh 3 bilood oo adeega iibka kadib. Inta lagu jiro wakhtigan, waxaanu bixinaa dabagalka mashruuca, caawinta cilad-raadinta, iyo fadhiyada Q&A si wax looga qabto wixii su'aalo ah ee la xidhiidha natiijooyinka.

Tilmaamaha Tusaalaha

Istaraatiijiyada Qabsashada Exon

Istaraatiijiyada Taxanaha

Soo saarista Xogta lagu taliyay

Sure Select Human All Exon v6 (Agilent)

ama xGen Exome Hybridization Panel v2 (IDT)

 

Illumina NovaSeq PE150

5-10 Gb

Xanuunada mendelian/cudurada dhifka ah:> 50x

Shaybaarada burada: ≥ 100x

Shuruudaha Tusaalaha

Tusaalaha Nooca

 

 Qadarka(Qubit®)

 

Xoog-saarid 

Mugga

 

 

 Daahirnimada (NanoDrop™)

 

DNA-da genomiga ah

 

≥ 50 ng
≥ 6 ng/μL
≥ 15 μl
 
OD260/280=1.8-2.0
 
xaaluf la'aan, faddarayn

 

Bioinformatics

WES_BI socodka shaqada_Cudurka-01

Falanqaynta bioinformatic ee muunadaha hWES-cudurka waxaa ka mid ah:

● Isku xigxiga xogta QC

● Tixraaca Genom-gaabista

● Aqoonsiga SNPs iyo InDels

● Sharaxaada hawleed ee SNPs iyo InDels

WES_BI socodka shaqada_Buro-01

Falanqaynta bioinformatic ee shaybaarada burada waxaa ka mid ah:

● Isku xigxiga xogta QC

● Tixraaca Genom-gaabista

● Aqoonsiga SNP-yada, InDels iyo kala duwanaanshaha somatic

● Aqoonsiga noocyada jeermiska

● Falanqaynta saxeexyada isbeddelka

● Aqoonsiga hiddo-wadaha wadista ee ku salaysan faa'iidada-shaqaynta isbeddellada

● Sharaxaada isbeddelka ee heerka u nuglaanshaha daroogada

● Falanqaynta kala duwanaanshaha - xisaabinta daahirsanaanta iyo saqafka

Socodka Shaqada Adeegga

muunad keenid

Tusaalaha keenista

Tijaabada tijaabada

Soo saarista DNA

Diyaarinta Maktabadda

Dhismaha maktabadda

Isku xigxiga

Isku xigxiga

Falanqaynta xogta

Falanqaynta xogta

数据上传-01

gaarsiinta xogta

Adeegyada iibka kadib

Adeegyada iibka kadib


  • Kii hore:
  • Xiga:

  • Xogta QC - Tirakoobka qabashada Exome

     

    wps_doc_22

     

    Aqoonsiga kala duwan - InDels

    图片36

    Falanqaynta sare: aqoonsiga iyo qaybinta SNPs/InDels-ka-dari-tirka ah-Sircos

     

    图片37

    Falanqaynta burada: aqoonsiga iyo qaybinta isbeddellada somatic - Shirarka Circos

     

    图片38

     

    Falanqaynta Tumor: lineages clonal

     

    图片39

     

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