Heatmap
Matrix data faira rinoshandiswa kupisa mepu kudhirowa, iyo inogona kusefa, kujaira uye cluster matrix data.Inonyanya kushandiswa pakuongororwa kwecluster ye gene expression level pakati pemasampuli akasiyana.
Gene Annotation
Gene function annotation inoitwa nemepu kutevedzana muFASTA faira ichipokana akasiyana dhatabhesi.
Gene Annotation
Basic Local Alignment Search Tool
CDS_UTR_Prediction
Ichi chishandiso chakagadzirirwa kufanotaura matunhu ekodha (CDS) neasiri-coding matunhu (UTR) mune yakapihwa zvinyorwa zvinoteedzana zvichibva pakuputika kunopesana neanozivikanwa mapuroteni database uye kufanotaura kweORF.
Manhattan Plot
Manhattan plot inogonesa kuratidzwa kwedata nehuwandu hukuru hwe data data.Inowanzoshandiswa mune genome-wide association zvidzidzo (GWAS).
Circos
CIRCOS dhayagiramu inogonesa kuratidzwa kwakananga kweSNP, InDeL, SV, CNV kugovera pane genome.
GO_Enrichment
TopGO chishandiso chakagadzirirwa kusimudzira kushanda.TopGO-Bioconductor package ine mutsauko wekutaura ongororo, GO enrichment ongororo uye kuona kwemhedzisiro.Ichagadzira folda ine inobuda inonzi "Graph", ine mibairo yetopGO_BP, topGO_CC uye topGO_MF.
WGCNA
WGCNA inzira inoshandiswa zvakanyanya yekuchera data yekutsvaga gene co-expression modules.Inoshanda kune akasiyana ekutaura dataset kusanganisira microarray data uye gene expression data yakatanga kubva kuchizvarwa chinotevera kutevedzana.
InterProScan
InterPro protein sequence ongororo uye kupatsanura
GO_KEGG_Enrichment
Ichi chishandiso dhizaini kugadzira GO enrichment histogram, KEGG enrichment histogram uye KEGG enrichment nzira yakavakirwa pane yakapihwa gene set uye inoenderana zvirevo.