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Zida Zamphamvu Zowunikira

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Heatmap

Fayilo ya data ya Matrix imagwiritsidwa ntchito pojambula mapu a kutentha, omwe amatha kusefa, kusinthana ndi data ya cluster matrix.Amagwiritsidwa ntchito kwambiri posanthula magulu amtundu wa jini pakati pa zitsanzo zosiyanasiyana.

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Gene Annotation

Kufotokozera kwamtundu wa gene kumapangidwa popanga mapu mu fayilo ya FASTA motsutsana ndi ma database osiyanasiyana.

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Gene Annotation

Chida Chachikulu Choyang'anira Kuyang'anira Malo

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CDS_UTR_Prediction

Chidachi chapangidwa kuti zilosere madera okhotakhota (CDS) ndi madera omwe sali okhomera (UTR) motsatizana ndi kuphulika motsatizana ndi nkhokwe ya mapuloteni odziwika komanso kulosera kwa ORF.

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Manhattan Plot

Chiwembu cha Manhattan chimathandizira kuwonetsa deta ndi ma data ambiri.Amagwiritsidwa ntchito kwambiri mu maphunziro a genome-wide Association (GWAS).

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Circos

Chithunzi cha CIRCOS chimathandizira kuwonetsa mwachindunji magawo a SNP, InDeL, SV, CNV pa genome.

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GO_Enrichment

TopGO ndi chida chopangidwira kupititsa patsogolo ntchito.Phukusi la TopGO-Bioconductor lili ndi kusanthula kwamafotokozedwe osiyanasiyana, kusanthula kopindulitsa kwa GO ndikuwonera zotsatira.Ipanga chikwatu chokhala ndi zotuluka zotchedwa "Graph", yomwe ili ndi zotsatira za topGO_BP, topGO_CC ndi topGO_MF.

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Mtengo WGCNA

WGCNA ndi njira yomwe imagwiritsidwa ntchito kwambiri pakufufuza ma gene co-expression module.Imagwiritsidwa ntchito pamitundu yosiyanasiyana yamafotokozedwe kuphatikiza ma microarray data ndi ma gene expression data yochokera ku mibadwo yotsatira.

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InterProScan

InterPro protein kusanthula ndi kugawa

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GO_KEGG_Enrichment

Chida ichi ndi mapangidwe kuti apange GO enrichment histogram, KEGG enrichment histogram ndi KEGG enrichment pathway kutengera jini zomwe zaperekedwa ndi ndemanga zofananira.

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