Imephu yobushushu
Isixhobo seHeatmap samkela ifayile yedatha ye-matrix njengengeniso kwaye sivumela abasebenzisi ukuba bahluze, baqhele kwaye baqokelele idatha. Eyona ndlela iphambili yokusebenzisa ii-heatmaps kukuhlalutya kweqela lenqanaba lokubonakaliswa kwezakhi zofuzo phakathi kweesampuli ezahlukeneyo.
Isaziso seGene
Isixhobo se-Gene Annotation senza i-gene annotation ngokusekelwe kulandelelwano lwefayile ze-FASTA ezifakwayo kwiidathabheyisi ezahlukeneyo.
Isixhobo sokukhangela esiSiseko soLungelelaniso lweNdawo (i-BLAST)
Isixhobo seBLAST yinguqulelo edibeneyo ye-BMKCloud ye-NCBI BLAST kwaye ingasetyenziselwa ukwenza imisebenzi efanayo kusetyenziswa idatha elayishwe kwiakhawunti yeBMKCloud.
Uqikelelo lwe-CDS_UTR
Isixhobo se-CDS_UTR Prediction senzelwe ukuqikelela imimandla yekhowudi (CDS) kunye nemimandla engeyiyo yekhowudi (UTR) kulandelelwano olunikiweyo lwe-transcript ngokusekelwe kwiziphumo ze-BLAST ngokuchasene nedathabheyisi yeprotheni eyaziwayo kunye neziphumo zokuqikelela ze-ORF.
Iploti yaseManhattan
Isixhobo seManhattan Plot senza kube lula ukubonisa iimvavanyo zesampulu eziphezulu kwaye sisetyenziswa rhoqo kwizifundo zobudlelwane be-genome-wide (GWAS).
Umzobo weCircos
Isixhobo se-CIRCOS Diagram sinika umfanekiso ochanekileyo wendlela iimpawu ze-genomic ezisasazwa ngayo kwi-genome. Iimpawu eziqhelekileyo ziquka i-quantitative loci, ii-SNP, ii-InDels, ii-structural kunye ne-copy number variants.
Uphuhliso lweGene Ontology (GO)
Isixhobo se-GO Enrichment sinika uhlalutyo olusebenzayo lokuphucula. Isoftware ephambili kwesi sixhobo yiphakheji ye-TopGO-Bioconductor, equka uhlalutyo lokubonisa umahluko, uhlalutyo lokuphucula i-GO kunye nokubona iziphumo.
Uhlalutyo lweNethiwekhi yoXwebhu lweZiza eziNqabileyo (i-WGCNA)
I-WGCNA yindlela esetyenziswa kakhulu yokuchonga idatha ekufumaneni iimodyuli zokubonisana kwezakhi zofuzo. Isebenza kwiiseti ezahlukeneyo zedatha yokubonisa kuquka idatha ye-microarray kunye nedatha yokubonakalisa izakhi zofuzo ze-NGS.
I-InterProScan
Isixhobo se-InterProScan sinika uhlalutyo kunye nokuhlelwa kwe-InterPro protein sequence.
Uphuhliso lwe-GO KEGG
Isixhobo se-GO KEGG Enrichment siyilwe ukuvelisa i-GO enrichment histogram, i-KEGG enrichment histogram kunye nendlela ye-KEGG enrichment ngokusekelwe kwiseti yejini enikiweyo kunye nenkcazo ehambelanayo.
