Maapụ okpomọkụ
Ngwa Heatmap na-anabata faịlụ data matrix dị ka ntinye ma na-enye ndị ọrụ ohere ịchacha, ịhazi ma chịkọta data. Isi ihe eji eme ihe maka heatmaps bụ nyocha mkpokọta nke ọkwa ngosipụta mkpụrụ ndụ ihe nketa n'etiti ihe atụ dị iche iche.
Nkọwa Mkpụrụ Ndụ
Ngwa nkọwa mkpụrụ ndụ ihe nketa na-eme nkọwa mkpụrụ ndụ ihe nketa dabere na nhazi usoro nke faịlụ FASTA ntinye megide ọtụtụ nchekwa data.
Ngwa Nchọgharị Nhazi Mpaghara Dị Mkpa (BLAST)
Ngwaọrụ BLAST bụ ụdị NCBI BLAST nke BMKCloud jikọtara ọnụ, enwere ike iji ya rụọ otu ọrụ ahụ site na iji data ebugoro na akaụntụ BMKCloud.
Amụma CDS_UTR
E mepụtara ngwa amụma CDS_UTR iji buru amụma mpaghara koodu (CDS) na mpaghara ndị na-abụghị koodu (UTR) n'usoro ederede enyere dabere na nsonaazụ BLAST megide nchekwa data protein a ma ama na nsonaazụ amụma ORF.
Mpaghara Manhattan
Ngwaọrụ Manhattan Plot na-enye ohere igosipụta nnwale dị elu ma a na-ejikarị ya eme ihe na ọmụmụ ihe gbasara mkpụrụ ndụ ihe nketa (GWAS).
Ihe osise Circos
Ngwa eserese CIRCOS na-enye ngosipụta dị irè nke otu esi ekesa njirimara genomic n'ofe genome. Ihe ndị a na-ahụkarị gụnyere loci quantitative, SNPs, InDels, ụdị ọnụọgụgụ nhazi na nke copy.
Ịbawanye Ọdịnaya Mkpụrụ Ndụ (GO)
Ngwa GO Enrichment na-enye nyocha mmụba ọrụ. Ngwanrọ bụ isi dị na ngwaọrụ a bụ ngwugwu TopGO-Bioconductor, nke gụnyere nyocha ngosipụta dị iche iche, nyocha mmụba GO na ịhụ ihe nsonaazụ ya.
Nyocha Netwọk Co-expression Gene Weighted (WGCNA)
WGCNA bụ ụzọ e si achọta modulu ngosipụta mkpụrụ ndụ ihe nketa. Ọ na-emetụta ọtụtụ data ngosipụta gụnyere data ngosipụta mkpụrụ ndụ ihe nketa microarray na NGS.
InterProScan
Ngwa InterProScan na-enye nyocha na nhazi usoro protein InterPro.
Ịbawanye KEGG
Ngwa GO KEGG Enrichment bụ nke e mere iji mepụta histogram enrichment GO, histogram enrichment KEGG na ụzọ enrichment KEGG dabere na usoro mkpụrụ ndụ ihe nketa enyere na nkọwa kwekọrọ.
