Imephu yokushisa
Ithuluzi le-Heatmap lamukela ifayela ledatha ye-matrix njengokufakiwe futhi livumela abasebenzisi ukuthi bahlunge, benze kube jwayelekile futhi bahlanganise idatha. Isimo esiyinhloko sokusetshenziswa kwamamephu okushisa ukuhlaziya kweqoqo leleveli yokusho izakhi zofuzo phakathi kwamasampuli ahlukene.
Isichasiselo seGene
Ithuluzi lesichasiselo seGene lenza isichasiselo sofuzo esisekelwe ekuhleleni ukulandelana kwamafayela e-FASTA okufakwayo ngokumelene nesizindalwazi esihlukahlukene.
Ithuluzi Lokusesha Lokuqondanisa Kwasendaweni Okuyisisekelo (BLAST)
Ithuluzi le-BLAST inguqulo ehlanganisiwe ye-BMKCloud ye-NCBI BLAST futhi ingasetshenziswa ukwenza imisebenzi efanayo kusetshenziswa idatha elayishwe ku-akhawunti ye-BMKCloud.
CDS_UTR Ukubikezela
Ithuluzi le-CDS_UTR Prediction yakhelwe ukubikezela izifunda zokubhala ikhodi (CDS) nezifunda ezingafaki amakhodi (UTR) ngokulandelana okunikiwe okulotshiwe okusekelwe emiphumeleni ye-BLAST ngokumelene nesizindalwazi samaprotheni esaziwayo kanye nemiphumela yokubikezela ye-ORF.
Isakhiwo saseManhattan
Ithuluzi le-Manhattan Plot livumela ukuboniswa kokuhlolwa kwesampula ephezulu futhi livame ukusetshenziswa ezifundweni ze-genome-wide association (GWAS).
Umdwebo we-Circos
Ithuluzi le-CIRCOS Diagram linikeza ukubonakala okuphumelelayo kokuthi isici se-genomic sisatshalaliswa kanjani ku-genome yonkana. Izici ezijwayelekile zifaka i-quantitative loci, ama-SNP, ama-InDels, ukwahluka kwenombolo yesakhiwo nekhophi.
I-Gene Ontology (GO) Ukucebisa
Ithuluzi le-GO Enrichment lihlinzeka ngokuhlaziywa kokunothisa okusebenzayo. Isofthiwe eyinhloko kuleli thuluzi iphakheji ye-TopGO-Bioconductor, ehlanganisa ukuhlaziywa kwenkulumo ehlukile, ukuhlaziywa kokucebisa kwe-GO kanye nokubonwa kwemiphumela.
I-Weighted Gene Co-expression Network Analysis (WGCNA)
I-WGCNA iyindlela esetshenziswa kakhulu yezimayini yedatha yokuthola amamojula wohlobo lokukhuluma ngokubambisana. Isebenza kudathasethi yezinkulumo ezihlukahlukene ezihlanganisa i-microarray kanye nedatha ye-NGS ye-gene expression.
I-InterProScan
Ithuluzi le-InterProScan lihlinzeka ngokuhlaziywa nokuhlukaniswa kwamaprotheni e-InterPro.
GO KEGG Ukucebisa
Ithuluzi Lokucebisa le-GO KEGG liwumklamo wokukhiqiza i-histogram yokucebisa ye-GO, i-histogram yokucebisa i-KEGG kanye nendlela yokucebisa ye-KEGG ngokusekelwe kusethi yofuzo enikeziwe kanye nesichasiselo esihambisanayo.