Imephu Yokushisa
Ithuluzi le-Heatmap lamukela ifayela ledatha le-matrix njengokufakwayo futhi livumela abasebenzisi ukuhlunga, ukulungisa kanye nokuhlanganisa idatha. Icala eliyinhloko lokusetshenziswa kwama-heatmap ukuhlaziywa kwama-cluster kwezinga lokubonakaliswa kwezakhi zofuzo phakathi kwamasampula ahlukene.
Isichasiselo Sezakhi Zofuzo
Ithuluzi le-Gene Annotation lenza isichasiselo se-gene ngokusekelwe ekulandeleni ukulandelana kwamafayela e-FASTA afakiwe ngokumelene nezizindalwazi ezahlukahlukene.
Ithuluzi Lokusesha Lokuqondanisa Kwendawo Eliyisisekelo (i-BLAST)
Ithuluzi le-BLAST liyinguqulo ehlanganisiwe ye-BMKCloud ye-NCBI BLAST futhi lingasetshenziswa ukwenza imisebenzi efanayo kusetshenziswa idatha elayishwe ku-akhawunti ye-BMKCloud.
Ukubikezela kwe-CDS_UTR
Ithuluzi Lokubikezela le-CDS_UTR lenzelwe ukubikezela izifunda zokubhala ikhodi (CDS) kanye nezifunda ezingezona zokubhala ikhodi (UTR) ngokulandelana okunikeziwe kokubhalwa okusekelwe emiphumeleni ye-BLAST ngokumelene nezizindalwazi zamaprotheni ezaziwayo kanye nemiphumela yokubikezela ye-ORF.
Isakhiwo saseManhattan
Ithuluzi leManhattan Plot livumela ukuboniswa kwezivivinyo zesampula ephezulu futhi livame ukusetshenziswa ezifundweni zokuhlangana kwe-genome-wide (GWAS).
Umdwebo we-Circos
Ithuluzi le-CIRCOS Diagram linikeza ukubona kahle ukuthi isici se-genomic sisatshalaliswa kanjani kulo lonke i-genome. Izici ezivamile zifaka phakathi i-quantitative loci, i-SNPs, i-InDels, izinhlobo zesakhiwo kanye nezinombolo zamakhophi.
Ukucebisa i-Gene Ontology (GO)
Ithuluzi le-GO Enrichment lihlinzeka ngokuhlaziywa kokunotha okusebenzayo. Isofthiwe eyinhloko kuleli thuluzi yiphakheji ye-TopGO-Bioconductor, ehlanganisa ukuhlaziywa kokubonakaliswa komehluko, ukuhlaziywa kokunotha kwe-GO kanye nokubona imiphumela.
Ukuhlaziywa Kwenethiwekhi Yokubonisana Kwezakhi Zofuzo Ezinesisindo (i-WGCNA)
I-WGCNA iyindlela yokumba idatha esetshenziswa kabanzi yokuthola amamojula wokubonisana kwezakhi zofuzo. Isebenza kusethi yedatha yokuveza ehlukahlukene kufaka phakathi idatha ye-microarray kanye nedatha yokuveza izakhi zofuzo ze-NGS.
I-InterProScan
Ithuluzi le-InterProScan lihlinzeka ngokuhlaziywa kokulandelana kwamaprotheni e-InterPro kanye nokuhlukaniswa.
Ukucebisa nge-GO KEGG
Ithuluzi le-GO KEGG Enrichment liwumklamo wokukhiqiza i-histogram yokucebisa i-GO, i-histogram yokucebisa i-KEGG kanye nendlela yokucebisa i-KEGG ngokusekelwe kusethi yezakhi zofuzo enikeziwe kanye nesichasiselo esihambisanayo.
