Fa'afanua Fa'avevela
E talia e le meafaigaluega Heatmap se faila fa'amaumauga matrix e fai ma fa'aulufalega ma e mafai ai e tagata fa'aoga ona fa'amama, fa'atulagaina ma fa'aputu fa'amaumauga. O le fa'aaogaina autu mo heatmaps o le su'esu'ega fa'aputu o le tulaga o le fa'aalia o kene i le va o fa'ata'ita'iga eseese.
Fa'amatalaga o le Gene
O le meafaigaluega o le Gene Annotation e faʻatino ai faʻamatalaga o gene e faʻavae i luga o le faʻatulagaina o faʻasologa o faila FASTA na tuʻuina atu e faʻasaga i faʻamaumauga eseese.
Meafaigaluega Fa'avae mo le Sailiga o le Fa'atulagaina o le Lotoifale (BLAST)
O le meafaigaluega BLAST o se faʻaliliuga tuʻufaʻatasia a le NCBI BLAST ua tuʻufaʻatasia ma le BMKCloud ma e mafai ona faʻaaogaina e faʻatino ai galuega tutusa e faʻaaoga ai faʻamatalaga ua lafoina i le teugatupe BMKCloud.
Vavalo a le CDS_UTR
O le meafaigaluega CDS_UTR Prediction ua mamanuina e vavalo ai itulagi fa'ailoga (CDS) ma itulagi e le o fa'ailoga (UTR) i fa'asologa o tusitusiga ua tu'uina atu e fa'avae i luga o taunu'uga o le BLAST e fa'asaga i fa'amaumauga o porotini ua iloa ma taunu'uga o valo'aga ORF.
Fanua o Manhattan
O le meafaigaluega a le Manhattan Plot e mafai ai ona faʻaalia faʻataʻitaʻiga maualuluga ma e masani ona faʻaaogaina i suʻesuʻega o le genome-wide association (GWAS).
Ata o le Sakesa
O le meafaigaluega CIRCOS Diagram e maua ai se fa'aaliga lelei o le auala o lo'o tufatufa atu ai foliga genomic i le genome atoa. O foliga masani e aofia ai le quantitative loci, SNPs, InDels, structural ma copy number variants.
Fa'aleleia atili o le Gene Ontology (GO)
O le meafaigaluega GO Enrichment e tuʻuina atu ai le auʻiliʻiliga o le faʻaleleia atili o galuega. O le polokalama autū i lenei meafaigaluega o le afifi TopGO-Bioconductor, lea e aofia ai le auʻiliʻiliga o le faʻaalia eseese, auʻiliʻiliga o le faʻaleleia atili o le GO ma le faʻaaliaina o taunuuga.
Su'esu'ega o le Feso'ota'iga Fa'atasi o Gene ua Fa'amamafaina (WGCNA)
O le WGCNA o se metotia e fa'aaogaina lautele mo le su'eina o fa'amaumauga mo le sailia o vaega o le fa'aalia fa'atasi o kenera. E fa'aaogaina i fa'amaumauga eseese o fa'aaliga e aofia ai le microarray ma fa'amaumauga o le fa'aalia o kenera NGS.
InterProScan
O le meafaigaluega InterProScan e maua ai le auiliiliga ma le fa'avasegaga o le fa'asologa o porotini a le InterPro.
Fa'aleleia atili o le GO KEGG
O le meafaigaluega GO KEGG Enrichment ua mamanuina e fausia ai se GO enrichment histogram, KEGG enrichment histogram ma le KEGG enrichment pathway e faʻavae i luga o se seti o kene ua tuʻuina atu ma se faʻamatalaga talafeagai.
